Tag: read count

  • RNA seq normalize read count RPKM= number of…

    Plus d'aide RNA-seq; normalize read count

    RPKM=(number of mapping reads)*1000bp*1 million reads/[(length of transcript)*(number of total reads )]

    http://www.clcbio.com/manual/genomics/Definition_RPKM.html
    http://seqanswers.com/forums/showthread.php?t=10657
    http://genomics.isi.edu/rnaseq/framework
    http://www.nature.com/nmeth/journal/v5/n7/pdf/nmeth.1226.pdf