Mask repetitive region using BEDtools.
intersectBed -a reads.bed -b repeat_region.bed -v
http://maintenance-informatique-22.fr/?share=email////\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\ 10,000 hour challenge of microbe
Mask repetitive region using BEDtools.
intersectBed -a reads.bed -b repeat_region.bed -v
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