mons-en-barœul annonce trans Index fasta file – generating fai file – to use with IGV or bedtools.
samtools faidx reference.fasta
http://genomeview.org/content/preparing-fasta-files
Tag: SAMTools
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Explains the SAM flags http picard sourceforge net…
Explains the SAM flags.
http://picard.sourceforge.net/explain-flags.html