10,000 hour challenge of microbe

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  • Recommended popular LaTeX packages 1 9 Essential packages…

    Pasrūr Recommended/popular LaTeX packages. 1. 9 Essential packages. http://www.howtotex.com/packages/9-essential-latex-packages-everyone-should-use/ 2. 10+ packages. http://blog.analogmachine.org/2011/05/16/top-10-latex-packages/ 3. Discussion in TeX StackExchange forum. http://tex.stackexchange.com/questions/553/what-packages-do-people-load-by-default-in-latex

    January 18, 2013
  • Figure out LaTeX symbol commands by drawing the…

    hourlong Figure out LaTeX symbol commands by drawing the symbol. detexify: draw a symbol, get the LaTeX command

    January 15, 2013
  • Remove an erroneous revision Let’s suppose revision 3…

    Remove an erroneous revision Let’s suppose revision 3 introduced an error, then hg backout -r 3 will remove the errors introduced in the revision.

    January 2, 2013
  • Redo the last substitute or command by in…

    Redo the last substitute or command by : in Vim @: For more repeats, it can be done by @@

    January 2, 2013
  • Find files and show the content recursively in…

    Find files and show the content recursively in unix. find . -name “readme” -exec head {} \; find . -name “readme” | xargs head

    December 14, 2012
  • Multiple histograms in a plot using ggplot2 ggplot…

    Multiple histograms in a plot using ggplot2. ggplot(test.melt, aes(x = value, fill = sample)) + geom_histogram(alpha = 0.3, position = ‘identity’, aes(y = ..density..)) + geom_density(alpha = 0.3, position = ‘identity’) Be careful. The default value for the position parameter is different the histogram and density plot. So set the parameter explicitly. Identity: overlap the […]

    November 28, 2012
  • To change two vertically split windows to horizontally…

    To change two vertically split windows to horizontally split Ctrl-W t Ctrl-W K Horizontally to vertically: Ctrl-W t Ctrl-W H Explanations: Ctrl-W t makes the first (topleft) window current Ctrl-W K moves the current window to full-width at the very top Ctrl-W H moves the current window to full-height at far left http://stackoverflow.com/questions/1269603/to-switch-from-vertical-split-to-horizontal-split-fast-in-vim

    November 27, 2012
  • Find duplicate or unique records in unix sort…

    Find duplicate or unique records in unix sort is essential because uniq find successive identical lines. Unique records cat data.txt | sort | uniq Duplicate records cat data.txt | sort | uniq -d

    November 27, 2012
  • Using gff format in IGV 1 Do not…

    Using gff format in IGV. 1. Do not omit the first line, especially for GFF 3. As IGV supports both of GFF ver 2 and GFF ver 3, the file needs to be distinguished. Do not miss the first line ##gff-version 3 2. Make sure tab is used to separate fields. Even for the first […]

    November 26, 2012
  • Index fasta file generating fai file to use…

    Index fasta file – generating fai file – to use with IGV or bedtools. samtools faidx reference.fasta http://genomeview.org/content/preparing-fasta-files

    November 26, 2012
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10,000 hour challenge of microbe

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